| Home | Deutsch | |
![]() |
||
|
Since 1988 a research group on adenoviruses is located at the Institute of Virology. This research group was closely linked to the German resource center for adenoviruses. Head of both units was Dr. Adrian, and later Dr. Pring-Åkerblom until the year 2000. Development of genotyping techniques by restriction fragment polymorphism and PCR methods for genus-, species- and type-specific PCR protocols were the first main goals. Research projects included studies on capsid structures of adenoviruses including elaborate sequencing studies on receptor binding sites and hemagglutination domains. Newer studies include the molecular phylogeny of the neutralization determinant (epsilon) and the hemagglutination determinant (gamma), as a basis for molecular classification and taxonomy for human adenoviruses. Results of this extensive project on molecular phylogeny indicated that all human adenoviruses can be unequivocally typed by simple sequencing of loop 2 of the neutralization determinant epsilon. Moreover, results demonstrated the significance of recombination events in the evolution of humen adenovirus types. Another project elucidated also the phylogeny of the penton base protein which binds to the secondary cellular receptor. Results of this study can be applied to the design of tissue specific gene therapy vectors. Another research focus is the pathogenesis of relevant diseases caused by adenoviruses, for example disseminated disease of the immunosuppressed patient and epidemic keratoconjunctivitis Projects focused on the virus load kinetics of disseminated adenovirus infections, including development of a quantitative PCR assay for adenoviruses. Furthermore, concentrations of adenovirus DNA in different organs and tissues were studied and correlated with symptoms. Molecular characterization of human adenovirus type 31 which caused several fatal infections in immunosuppressed patients is another research topic. PD Dr. med. Albert Heim
+49 (0)511 532 4311 | Heim.Albert@MH-Hannover.DeGabriele Harste, MTA
+49 (0)511 532 4327 | Harste.Gabriele@MH-Hannover.DeSebastian Darr, Doktorand +49 (0)511 532 4327 | Darr.Sebastian@MH-Hannover.De Rüdiger Stock, Doctoral candidate Ijad Madisch, Doctoral candidate +49 (0)511 532 4311 | Madisch.Ijad@MH-Hannover.De Sören Hofmayer, Doctoral candidate +49 (0)511 532 4311 | Hofmayer.Soeren@MH-Hannover.De Current research, project information and links
Project information
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Software PNCH |
PNCH - pairwise nucleotide comparison histogram maker- freeware von I. Madisch. Dieses Programm erstellt Histogramme aus Matrix (Sequenz-Identität) Dateien mit der Option diese als Grafik Datei zu exportieren. Das Programm ist ein "p file" des MatLab Softwarepakets und erfordert zur Ausführung eine lizensierte MatLab Installation. Die zu importierende Matrix Datei muß im Excel (*.xls) oder als Komma getrennte Tabelle (*.csv) vorliegen.
|
Molecular Identification of Adenovirus Sequences: a Rapid Scheme for Early Typing of Human Adenoviruses in Diagnostic Samples of Immunocompetent and Immunodeficient Patients
|
For simplifying molecular typing you can download the following databases which only contain relevant human adenovirus sequences.
Based on this database an online adenovirus local Blast search with the relevant adenovirus sequences for typing is provided by Professor Balazs Harrach and Dr. Peter Elo (Veterinary Medical Research Institute, Hungarian Academy of Sciences). This website permits rapid and simple typing results after submitting hexon loop2 or hexon 5´end (generic PCR) sequences
Direct Blast Server for Molecular Typing of Adenoviruses (Two step concept including L2-Sequences)Madisch I, Heim A (2007) Extent of circulation of incorrectly labeled adenovirus 50 and 51 prototype preparations. J Clin Microbiol 45:2092
Madisch I, Hofmayer S, Moritz C, Grintzalis A, Hainmueller J, Pring-Akerblom P, Heim A (2007) Phylogenetic analysis and structural predictions of human adenovirus penton proteins as a basis for tissue-specific adenovirus vector design. J Virol 81:8270-81.
Hoffmann D, Heim A, Nettelbeck DM, Steinstraesser L, Wildner O. (2007) Evaluation of Twenty Human Adenoviral Types and One Infectivity-Enhanced Adenovirus for the Therapy of Soft Tissue Sarcoma. Hum Gene Ther. 2006 Dec 18: 51-62.
Engelmann I, Madisch I, Pommer H, Heim A. (2006) An outbreak of epidemic keratoconjunctivitis caused by a new intermediate adenovirus 22/H8 identified by molecular typing. Clin Infect Dis. 43:e64-6.
Stock R, Harste G, Madisch I, Heim A. (2006) A rapid quantitative PCR-based assay for testing antiviral agents against human adenoviruses demonstrates type specific differences in ribavirin activity. Antiviral Res. 72:34-41.
Madisch I, Wolfel R, Harste G, Pommer H, Heim A (2006) Molecular identification of adenovirus sequences: A rapid scheme for early typing of human adenoviruses in diagnostic samples of immunocompetent and immunodeficient patients. J Med Virol. 78, 1210-17.
Madisch I., Harste G., Pommer H., Heim A. " Phylogenetic Analysis of Main Neutralization (e) and Hemagglutination (g) Determinants of all Human Adenovirus Prototypes as a Basis for Molecular Classification and Taxonomy" J. Virol, 79, 15265-76.
van Heerden J., Ehlers MM, Heim A., Grabow WOK. "Prevalence, quantification and typing of adenoviruses detected in river and treated drinking water in South Africa." J Appl. Microbiol. 2005, 99: 234-242.
Seidemann K., Heim A., Pfister E., Koditz H., Beilken A., Sander A., Melter M., Sykora KW, Sasse M., Wessel A. "Monitoring of adenovirus infection in pediatric transplant recipients by quantitative PCR." Am J Transplant, 2004, 4(12): 2102-8.
Sauerbrei A., Sehr K., Brandstadt A., Heim A., Reimer K., Wutzler P. "Sensitivity of human adenoviruses to different groups of chemical biocides." J Hosp Infect, 2004, 57: 59-66.
Friedrichs N., Eis-Hubinger AM., Heim A., Platen E., Zhou H., Buettner R. "Acute adenoviral infection of a graft by serotype 35 following renal transplantation." Pathol Res Pract, 2003; 199: 565-570.
Heim A., Ebnet C., Harste G., Pring-Åkerblom P. "Rapid and Quantitative Detection of Human Aenovirus DNA by Real-Time PCR." J Med Virology, 2003 70:228-239.
Arnberg N., Kidd AH, Edlund K., Nilsson J., Pring-Åkerblom P., Wadell G. "Adenovirus type 37 binds to cell surface sialic acid through a charge-dependent interaction." Virology. 2002 Oct 10;302(1):33-43.
Arnberg N., Pring-Åkerblom P., Wadell G. "Adenovirus type 37 uses sialic acid as a cellular receptor on Chang C cells." J Virol. 2002 Sep;76(1 7):8834-41.
Blusch JH, Deryckere F., Windheim M., Ruzsics Z., Arnberg N., Adrian T., Burgert HG. "The novel early region 3 protein E3/49K is specifically expressed by adenoviruses of subgenus D: implications for epidemic keratoconjunctivitis and adenovirus evolution." Virology. 2002 Apr 25;296(1):94-106.
Cichon G., Boeckh-Herwig S., Schmidt HH., Wehnes E., Muller T., Pring-Åkerblom P., Burger R. "Complement activation by recombinant adenoviruses." Gene Ther. 2001 Dec;8(23):1794-800.
Pring-Åkerblom P., Trijssenaar FE., Adrian T., Hoyer H. "Multiplex polymerase chain reaction for subgenus-specific detection of human adenoviruses in clinical samples." J Med Virol. 1999 May;58(1):87-92.
Grumbach IM, Heim A., Pring-Åkerblom P., Vonhof S., Hein WJ, Muller G., Figulla HR. "Adenoviruses and enteroviruses as pathogens in myocarditis and dilated cardiomyopathy." Acta Cardiol. 1999 Apr;54(2):83-8.
Liebermann H., Mentel R., Bauer U., Pring-Åkerblom P., Dolling R., Modrow S., Seidel W. ."Receptor binding sites and antigenic epitopes on the fiber knob of human adenovirus serotype 3." J Virol. 1998 Nov;72(11):9121-30.
Pring-Åkerblom P., Heim A., Trijssenaar FE. "Molecular characterization of hemagglutination domains on the fibers of subgenus D adenoviruses." J Virol. 1998 Mar;72(3):2297-304.
Eiz B., Pring-Åkerblom P. "Molecular characterization of the type-specific gamma-determinant located on the adenovirus fiber." J Virol. 1997 Sep;71(9):6576-81.
Pring-Åkerblom P., Blazek K., Schramlova J., Kunstyr I. "Polymerase chain reaction for detection of guinea pig adenovirus." J Vet Diagn Invest. 1997 Jul;9(3):232-6.
Pring-Åkerblom P., Adrian T., Kostler T. "PCR-based detection and typing of human adenoviruses in clinical samples." Res Virol. 1997 May-Jun;148(3):225-31.
Pring-Åkerblom P., Heim A., Trijssenaar FE. "Conserved sequences in the fibers of epidemic keratoconjunctivitis associated human adenoviruses." Arch Virol. 1997;142(1):205-11.
Eiz B., Adrian T., Pring-Åkerblom P. "Recombinant fibre proteins of human adenoviruses Ad9, Ad15 and Ad19: localization of the haemagglutination properties and the type-specific determinant." Res Virol. 1997 Jan-Feb;148(1):5-10.
Adrian T. "Genome polymorphism of human adenoviruses of subgenus C." Arch Virol. 1996;141(6):1021-31.
Eiz B., Adrian T., Pring-Åkerblom P. "Immunological adenovirus variant strains of subgenus D: comparison of the hexon and fiber sequences." Virology. 1995 Nov 10;213(2):313-20.
Pring-Åkerblom P., Trijssenaar FE., Adrian T.. "Hexon sequence of adenovirus type 7 and comparison with other serotypes of subgenus B." Res Virol. 1995 Nov-Dec;146(6):383-388.
Pring-Åkerblom P., Trijssenaar FE., Adrian T. "Sequence characterization and comparison of human adenovirus subgenus B and E hexons." Virology. 1995 Sep 10;212(1):232-6.
Pring-Åkerblom P., Adrian T. "Sequence characterization of the adenovirus 31 fibre and comparison with serotypes of subgenera A to F." Res Virol. 1995 Sep-Oct;146(5):343-54.
Pring-Åkerblom P., Adrian T. "Characterization of adenovirus subgenus D fiber genes." Virology. 1995 Jan 10;206(1):564-71.
Pring-Åkerblom P., Adrian T. "Type- and group-specific polymerase chain reaction for adenovirus detection." Res Virol. 1994 Jan-Feb;145(1):25-35.
Pring-Åkerblom P., Adrian T. "The hexon genes of adenoviruses of subgenus C: comparison of the variable regions." Res Virol. 1993 Mar-Apr;144(2):117-27.
Adrian T., Brunnemann H., Wigand R. "Adenovirus isolations from patients with conjunctivitis in Thuringia." Zentralbl Bakteriol. 1993 Feb;278(1):127-31.
Adrian T. "Genome type analysis of adenovirus type 4." Intervirology. 1992;34(4):180-3.
Adrian T., Wigand R. "Restriction site mapping of subgenus D adenoviruses, prototypes 42-47, intermediate and atypical strains." Zentralbl Bakteriol. 1991 Dec;276(1):107-19.
Wigand R., Adrian T. "A rational system for classifying and denominating adenovirus genome types." Res Virol. 1991 Jan-Feb;142(1):47-56.
Adrian T., Wolf U., Lauer HJ., Wigand R. "Restriction site mapping of adenovirus type 8 genome types." Res Virol. 1990 Nov-Dec;141(6):611-24.
Adrian T., Sassinek J., Wigand R. "Genome type analysis of 480 isolates of adenovirus types 1, 2, and 5." Arch Virol. 1990;112(3-4):235-48.
Wigand R., Adrian T. "Restriction site mapping of adenovirus prototypes of subgenus D." Med Microbiol Immunol (Berl). 1990;179(2):67-75.
Adrian T., Wolf U. "Adenovirus 6 genome types: mapping of restriction site alterations on the genome." Res Virol. 1989 Nov-Dec;140(6):545-50.
Adrian T., Schlipkoter U., Roggendorf M., Wigand R. "Nosocomial and endemic infections with a genome type of adenovirus type 5." Zentralbl Bakteriol. 1989 Sep;271(3):339-44. PMID: 2553041 [PubMed - indexed for MEDLINE]
Adrian T, Best B, Hierholzer JC, Wigand R. "Molecular epidemiology and restriction site mapping of adenovirus type 3 genome types." J Clin Microbiol. 1989 Jun;27(6):1329-34.
Adrian T., Wigand R. "Genome type analysis of certain adenovirus serotypes of subgenus D." Zentralbl Bakteriol Mikrobiol Hyg [A]. 1989 Mar;270(4):527-33.
Adrian T., Wigand R., Knocke KW., Schafer G., Grundmann M. "Genome type analysis of adenoviruses: isolates from one year from the Hannover area." Arch Virol. 1989;105(1-2):89-101.
Adrian T., Becker M., Hierholzer JC., Wigand R. "Molecular epidemiology and restriction site mapping of adenovirus 7 genome types." Arch Virol. 1989;106(1-2):73-84.
Adrian T., Bastian B., Wagner V. "Restriction site mapping of adenovirus types 9 and 15 and genome types of intermediate adenovirus. "15/H9. Intervirology. 1989;30(3):169-76.
Wigand R, Adrian T. "Intermediate adenovirus strains of subgenus D occur in extensive variety." Med Microbiol Immunol (Berl). 1989;178(1):37-44.
Friedrichs N., Eis-Hubinger AM., Heim A., Platen E., Zhou H., Buettner R. "Acute adenoviral infection of a graft by serotype 35 following renal transplantation." Pathol Res Pract, 2003; 199: 565-570.
Heim A., Ebnet C., Harste G., Pring-Åkerblom P. "Rapid and Quantitative Detection of Human Aenovirus DNA by Real-Time PCR." J Med Virology, 2003 70:228-239.
Arnberg N., Kidd AH, Edlund K., Nilsson J., Pring-Åkerblom P., Wadell G. "Adenovirus type 37 binds to cell surface sialic acid through a charge-dependent interaction." Virology. 2002 Oct 10;302(1):33-43.
Arnberg N., Pring-Åkerblom P., Wadell G. "Adenovirus type 37 uses sialic acid as a cellular receptor on Chang C cells." J Virol. 2002 Sep;76(1 7):8834-41.
Blusch JH, Deryckere F., Windheim M., Ruzsics Z., Arnberg N., Adrian T., Burgert HG. "The novel early region 3 protein E3/49K is specifically expressed by adenoviruses of subgenus D: implications for epidemic keratoconjunctivitis and adenovirus evolution." Virology. 2002 Apr 25;296(1):94-106.
Cichon G., Boeckh-Herwig S., Schmidt HH., Wehnes E., Muller T., Pring-Åkerblom P., Burger R. "Complement activation by recombinant adenoviruses." Gene Ther. 2001 Dec;8(23):1794-800.
Pring-Åkerblom P., Trijssenaar FE., Adrian T., Hoyer H. "Multiplex polymerase chain reaction for subgenus-specific detection of human adenoviruses in clinical samples." J Med Virol. 1999 May;58(1):87-92.
Grumbach IM, Heim A., Pring-Åkerblom P., Vonhof S., Hein WJ, Muller G., Figulla HR. "Adenoviruses and enteroviruses as pathogens in myocarditis and dilated cardiomyopathy." Acta Cardiol. 1999 Apr;54(2):83-8.
Liebermann H., Mentel R., Bauer U., Pring-Åkerblom P., Dolling R., Modrow S., Seidel W. ."Receptor binding sites and antigenic epitopes on the fiber knob of human adenovirus serotype 3." J Virol. 1998 Nov;72(11):9121-30.
Pring-Åkerblom P., Heim A., Trijssenaar FE. "Molecular characterization of hemagglutination domains on the fibers of subgenus D adenoviruses." J Virol. 1998 Mar;72(3):2297-304.
Eiz B., Pring-Åkerblom P. "Molecular characterization of the type-specific gamma-determinant located on the adenovirus fiber." J Virol. 1997 Sep;71(9):6576-81.
Pring-Åkerblom P., Blazek K., Schramlova J., Kunstyr I. "Polymerase chain reaction for detection of guinea pig adenovirus." J Vet Diagn Invest. 1997 Jul;9(3):232-6.
Pring-Åkerblom P., Adrian T., Kostler T. "PCR-based detection and typing of human adenoviruses in clinical samples." Res Virol. 1997 May-Jun;148(3):225-31.
Pring-Åkerblom P., Heim A., Trijssenaar FE. "Conserved sequences in the fibers of epidemic keratoconjunctivitis associated human adenoviruses." Arch Virol. 1997;142(1):205-11.
Eiz B., Adrian T., Pring-Åkerblom P. "Recombinant fibre proteins of human adenoviruses Ad9, Ad15 and Ad19: localization of the haemagglutination properties and the type-specific determinant." Res Virol. 1997 Jan-Feb;148(1):5-10.
Adrian T. "Genome polymorphism of human adenoviruses of subgenus C." Arch Virol. 1996;141(6):1021-31.
Eiz B., Adrian T., Pring-Åkerblom P. "Immunological adenovirus variant strains of subgenus D: comparison of the hexon and fiber sequences." Virology. 1995 Nov 10;213(2):313-20.
Pring-Åkerblom P., Trijssenaar FE., Adrian T.. "Hexon sequence of adenovirus type 7 and comparison with other serotypes of subgenus B." Res Virol. 1995 Nov-Dec;146(6):383-388.
Pring-Åkerblom P., Trijssenaar FE., Adrian T. "Sequence characterization and comparison of human adenovirus subgenus B and E hexons." Virology. 1995 Sep 10;212(1):232-6.
Pring-Åkerblom P., Adrian T. "Sequence characterization of the adenovirus 31 fibre and comparison with serotypes of subgenera A to F." Res Virol. 1995 Sep-Oct;146(5):343-54.
Pring-Åkerblom P., Adrian T. "Characterization of adenovirus subgenus D fiber genes." Virology. 1995 Jan 10;206(1):564-71.
Pring-Åkerblom P., Adrian T. "Type- and group-specific polymerase chain reaction for adenovirus detection." Res Virol. 1994 Jan-Feb;145(1):25-35.
Pring-Åkerblom P., Adrian T. "The hexon genes of adenoviruses of subgenus C: comparison of the variable regions." Res Virol. 1993 Mar-Apr;144(2):117-27.
Adrian T., Brunnemann H., Wigand R. "Adenovirus isolations from patients with conjunctivitis in Thuringia." Zentralbl Bakteriol. 1993 Feb;278(1):127-31.
Adrian T. "Genome type analysis of adenovirus type 4." Intervirology. 1992;34(4):180-3.
Adrian T., Wigand R. "Restriction site mapping of subgenus D adenoviruses, prototypes 42-47, intermediate and atypical strains." Zentralbl Bakteriol. 1991 Dec;276(1):107-19.
Wigand R., Adrian T. "A rational system for classifying and denominating adenovirus genome types." Res Virol. 1991 Jan-Feb;142(1):47-56.
Adrian T., Wolf U., Lauer HJ., Wigand R. "Restriction site mapping of adenovirus type 8 genome types." Res Virol. 1990 Nov-Dec;141(6):611-24.
Adrian T., Sassinek J., Wigand R. "Genome type analysis of 480 isolates of adenovirus types 1, 2, and 5." Arch Virol. 1990;112(3-4):235-48.
Wigand R., Adrian T. "Restriction site mapping of adenovirus prototypes of subgenus D." Med Microbiol Immunol (Berl). 1990;179(2):67-75.
Adrian T., Wolf U. "Adenovirus 6 genome types: mapping of restriction site alterations on the genome." Res Virol. 1989 Nov-Dec;140(6):545-50.
Adrian T., Schlipkoter U., Roggendorf M., Wigand R. "Nosocomial and endemic infections with a genome type of adenovirus type 5." Zentralbl Bakteriol. 1989 Sep;271(3):339-44. PMID: 2553041 [PubMed - indexed for MEDLINE]
Adrian T, Best B, Hierholzer JC, Wigand R. "Molecular epidemiology and restriction site mapping of adenovirus type 3 genome types." J Clin Microbiol. 1989 Jun;27(6):1329-34.
Adrian T., Wigand R. "Genome type analysis of certain adenovirus serotypes of subgenus D." Zentralbl Bakteriol Mikrobiol Hyg [A]. 1989 Mar;270(4):527-33.
Adrian T., Wigand R., Knocke KW., Schafer G., Grundmann M. "Genome type analysis of adenoviruses: isolates from one year from the Hannover area." Arch Virol. 1989;105(1-2):89-101.
Adrian T., Becker M., Hierholzer JC., Wigand R. "Molecular epidemiology and restriction site mapping of adenovirus 7 genome types." Arch Virol. 1989;106(1-2):73-84.
Adrian T., Bastian B., Wagner V. "Restriction site mapping of adenovirus types 9 and 15 and genome types of intermediate adenovirus. "15/H9. Intervirology. 1989;30(3):169-76.
Wigand R, Adrian T. "Intermediate adenovirus strains of subgenus D occur in extensive variety." Med Microbiol Immunol (Berl). 1989;178(1):37-44.